Whole genome sequencing of Galemys pyrenaicus IBE-C3773 - SRA

SRX10243619: Whole genome sequencing of Galemys pyrenaicus IBE-C3773
1 ILLUMINA (HiSeq X Ten) run: 90.4M spots, 27.3G bases, 10.6Gb downloads

Design: Shotgun whole genome sequencing from genomic DNA, insert size 350 bp

Submitted by: Institute of Evolutionary Biology (CSIC-UPF)

Study: Galemys pyrenaicus genome sequencing

PRJNA705855 • SRP309434 • All experiments • All runs

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The complete genome of the endangered Pyrenean desman (Galemys pyrenaicus) has been sequenced from one male specimen. Genome sequence data was obtained from five additional specimens. The purpose of the project was to study how the combination of strong population bottlenecks and high inbreeding levels is reflected in the genomic landscape of a threatened species like this one.

Sample: Tissue sample from Pyrenean desman IBE-C3773, collected in the Southeastern Iberian Range (La Rioja, Spain) in 2011

SAMN18106614 • SRS8384760 • All experiments • All runs

Organism: Galemys pyrenaicus

Library:

Name: C3773_20Gb

Instrument: HiSeq X Ten

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 90.4M spots, 27.3G bases, 10.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR13862639	90,399,140	27.3G	10.6Gb	2021-06-01

ID:: 13371195

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